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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs60635378 chr8:11784861 T/C SGK223 chr8:8175258-8244008:- 0.36 6.55 1.51E-10 Box Plot
THCA rs6068941 chr20:53302913 G/T EIF5B chr2:99953816-100017789:+ 0.3 6.4 3.79E-10 Box Plot
THCA rs60701331 chr6:151734061 C/T NEK5 chr13:52607747-52703214:- 0.61 6.96 1.14E-11 Box Plot
THCA rs60704749 chr7:140153707 T/TA LOC441455 chr9:99488103-99489749:+ 0.51 6.76 3.96E-11 Box Plot
THCA rs607065 chr11:49240670 T/C FOLH1B chr11:89372395-89431886:+ 0.48 7.93 1.62E-14 Box Plot
THCA rs60713996 chr14:66731753 T/C ATP6V1D chr14:67761088-67826982:- 0.31 6.41 3.46E-10 Box Plot
THCA rs60755617 chr8:10243327 T/G SGK223 chr8:8175258-8244008:- -0.36 -6.68 6.56E-11 Box Plot
THCA rs60764175 chr11:48775856 T/G FOLH1B chr11:89372395-89431886:+ 0.44 6.37 4.47E-10 Box Plot
THCA rs6078809 chr20:1340965 C/G FKBP1AP1 chr19:58337829-58338146:- 0.37 6.02 3.38E-9 Box Plot
THCA rs6078982 chr20:1382500 G/C FKBP1AP1 chr19:58337829-58338146:- -0.46 -5.92 6.25E-9 Box Plot
THCA rs6079139 chr20:1422265 A/G FKBP1AP1 chr19:58337829-58338146:- 0.43 7.72 6.68E-14 Box Plot
THCA rs60794883 chr3:125802605 G/C ROPN1 chr3:123687368-123711025:- -0.35 -6.34 5.36E-10 Box Plot
THCA rs608389 chr11:77595642 A/G INTS4L1 chr7:64601603-64694600:+ 0.44 8.01 8.97E-15 Box Plot
THCA rs608539 chr11:77584869 G/C INTS4L1 chr7:64601603-64694600:+ 0.44 7.98 1.09E-14 Box Plot
THCA rs60862620 chr8:11782464 G/C SGK223 chr8:8175258-8244008:- -0.45 -8.6 1.11E-16 Box Plot